Due to the change of the Tabder from a Capital Ship, to a Freighter, all players have had their capital ship piloting skills refunded, and can now re-allocate them to where they're needed. Go nuts.
Arete Edit: Presumably due to an issue with the script for this refund, not all players have had their Capital Ship Piloting skills refunded. It is widespread and also well reported. No need to submit more bug reports, support tickets, or questions in #swc-help. We'll get it fixed soon.